Erik Jorgensen

Professor of Biology
Investigator of the Howard Hughes Institute

The Jorgensen Lab Home Page
Molecular Neuroscience
Cellular Neuroscience
B.A. 1979, University of California, Berkeley; Ph.D. 1989; University of Washington; Postdoctoral Fellow, 1989-1994, Massachusetts Institute of Technology


Mechanisms of synaptic function

What is the molecular nature of memory? Memory is encoded by changes in the strength of synapses. It is our goal to identify the molecules that function at the synapse and to understand how the activities of these molecules are changed to strengthen or weaken a synapse. To identify such molecules we perform genetic screens for defects in neurotransmission in the nematode Caenorhabditis elegans (Fig. 1) and then validate our conclusions in the mouse.
Fig. 1, The nematode C. elegans expressing GFP in a subset of neurons.

C. elegans is particularly advantageous for genetic studies of the nervous system for four reasons: First, mutants with defective synapses are viable and can be studied as adults. Second, we can select for mutants with defective neurotransmission using drug resistance screens. Third, manipulation of the genome using Mos transposons and CRISPR is particularly easy and the generation time is only three days. Fourth, we can characterize mutant synapses at the ultrastructural and electrophysiological level.

To validate our findings we characterize mutants in dissociated hippocampal cultures from the mouse. The mouse is particularly advantageous because first, mutants in synaptic proteins are readily available and second, the genome can be altered in cultured neurons using lentivirus infection. To analyze synapses we have developed new methods in electrophysiology, new instrumentation for electron microscopy ('flash-and-freeze), instrumentation for super-resolution fluorescence microscopy and correlative super-resolution electron microscopy.

What are the molecular mechanisms of vesicle fusion? In our screens we have identified UNC-13, UNC-18 and the SNARE proteins. We are characterizing the molecular interactions that drive fusion. Using electrophysiological recordings and analysis of vesicles by electron microscopy we have determined that these proteins are required for docking and priming vesicles for release at the cell membrane.

What are the molecular mechanisms of synaptic vesicle retrieval? Once synaptic vesicles have fused with the plasma membrane, the components must be retrieved from the plasma membrane via endocytosis to regenerate a reserve pool of vesicles. We have discovered a new trafficking pathway for the recycling of synaptic vesicles called "ultrafast endocytosis" (Fig. 2).
Fig. 2, An electron tomogram of a mouse hippocampal synapse regenerating vesicles (arrows) from a synaptic endosome 3 seconds after stimulation.

What neurotransmitters function at synapses? We have discovered new neurotransmitters, including protons and the metabolite betaine. We have also found that some neurotransmitters work by unexpected mechanisms, for example the most common inhibitory neurotransmitter GABA, can also act as an excitatory neurotransmitter by activating cation channels. These studies reveal an unforeseen richness in the molecular complexity of the nervous system – and hence the brain.

Selected Publications:

Watanabe, S., Trimbuch, T., Camacho-Pérez. M., Rost, B.R., Brokowski, B., Söhl-Kielczynski, B., Felies, A., Davis, M.W., Rosenmund, C., and Jorgensen, E.M. (2014) Clathrin regenerates synaptic vesicles from endosomes. Nature, 515:228-233.

Hollopeter, G.H., Lange, J.J., Zhang, Y., Vu, T.N., Gu, M., Ailion, M., Lambie, E.J., Slaughter, B.D., Unruh, J.R., Florens, L., and Jorgensen, E.M. (2014) The membrane-associated proteins FCHo and SGIP are allosteric activators of the AP2 clathrin adaptor complex. eLife, 3, e03648.

Frøkjær-Jensen, C., Davis, M.W., Sarov, M., Taylor, J., Flibotte, S., LaBella, M., Pozniakovski, A., Moerman, D.G., and Jorgensen, E.M. (2014) Random and targeted transgene insertion in C. elegans using a modified Mos1 transposon. Nature Methods, 11:529-534.

Watanabe, S., Davis, M.W., and Jorgensen, E.M. (2014) Flash-and-freeze electron microscopy: coupling optogenetics with high-pressure freezing. In: Imaging nanoscale dynamics at synapses. Ed. V. Nägerl and A. Triller. Springer Verlag. Neuromethods, 84:43-57. Book chapter.

Watanabe, S., Rost, B., Camacho, M., Davis, M.W., Söhl-Kielczynski, B., Felies, A., Rosenmund, C., and Jorgensen, E.M., (2013) Ultrafast endocytosis at mouse hippocampal synapses. Nature, 504:242–247.

Peden, A.S., Mac, P., Fei, Y.J., Castro, C., Jiang, G., Murfitt, K.J., Miska, E.A., Ganapathy, V., and Jorgensen, E.M. (2013) Betaine acts on ligand-gated ion channel in the nervous system of the nematode C. elegans. Nature Neuroscience, 16:1794-1801.

Shao, Z., WatanabeS., Christensen, R., Jorgensen, E.M., and Colón-Ramos, D.A. (2013) Synapse location during growth depends on glia location. Cell, 154:337-350.

Watanabe, S., and Jorgensen, E.M. (2012) Visualizing proteins in electron micrographs at nanometer resolution. In: Correlative Light and Electron Microscopy, Academic Press. Ed. T. Müller-Reichert and P. Verkade. Methods in Cell Biology, 111:283-306. Book chapter.